Step 2: Add additional data belonging to this session

1. Add participant demographic information

In case this is a new participant, add demographic data for this subject.

If you have collected additional participant demographic data besides sex and age we assume you have resolved the relevant template issue and prepared the additional column and its annotation.

Add data and ensure the following:

• There are tabs, not spaces between columns
• There is an empty line at the end of the file
• There are no additional spaces and wrong characters in your file
• For missing data, fill in n/a

If you add data and get a merge conflict on your participant file, contact your data steward.

2. Add event data

If you collected task MRI data you will have to add your event files in the merge request before it can be merged in. We assume you have generated event files in accordance with our task experiment data guide.

Event data can be further processed later (calculate correct responses, reaction times, etc.). Ensure all necessary information for postprocessing is provided by describing the events.tsv file in the events.json file.

Add your event files and ensure the following:

• Correctly name the file to match the name of the imaging file, replacing _bold.nii[.gz] with _events.tsv
• Check bids validation to ensure all events are described in an _events.json file
• If applicable, add the original log file of your experiment in the sourcedata directory

Add log files following the same directory structure and file name conventions as the converted data:

.
└── dataset/
    ├── sourcedata/
    │   └── sub-01/
    │       └── ses-01/
    │           └── func/
    │               └── sub-01_ses-01-acq-sqedaddel_events.log
    └── sub-01/
        └── ses-01/
            └── func/
                ├── sub-01_ses-01-acq-sqedaddel_bold.nii
                └── sub-01_ses-01-acq-sqedaddel_events.tsv

If you do not have an events.json file yet, follow these steps:

• Generate the file here. (Under action, select Generate sidecar template. Upload your events.tsv file and click Process)
• Place this file at the top level of your dataset, naming it task-_events.json
• Fill in all Descriptions

If a column value is not described in your events.json, ensure you add information following appropriate json syntax. For example:

    "stimulus": {
       "Description": "Description for stimulus",
       "HED": {
          "face": "(Face, Human-agent)",
          "house": "(Building)"
       },
       "Levels": {
          "face": "Centrally presented image of human face",
          "house": "Centrally presented image of a house"
       }
    }

If for some subject you presented a third stimulus type word, simply extend as such:

    "stimulus": {
       "Description": "Description for stimulus",
       "HED": {
          "face": "(Face, Human-agent)",
          "house": "(Building)",
          "word": "(Word)"
       },
       "Levels": {
          "face": "Centrally presented image of human face",
          "house": "Centrally presented image of a house",
          "word": "Centrally presented German word"
       }
    }

Warning

All event files of the same task should have the same columns. Inconsistencies in this between subjects point to an issue in your task labels. Contact a data steward.

Add questionnaire data

If you are acquiring questionnaire data using paper and pencil we recommend you convert it directly and add it to the participant merge request. The handbook details how your data should be organized.

In general questionnaire data can be added for all participants at once, once data collection is complete. Follow the handbook to correctly organize your phenotypic data.