Example MRI Sequences — Salzburg¶

The following tables provide example sequences that have been used in Salzburg. For more details view the exported pdf-file (see here how to create such a file for your study).

Scout¶

Name	Head coil	Voxel size	Slices	TR	TE	Duration
`anat-scout_acq-aal64loc`	64	1.6 mm	128	3.15 ms	1.37 ms	00:14
`anat-scout_acq-aal20loc`	20	1.6 mm	128	3.15 ms	1.37 ms	00:14

Scout

The scout will not be exported with the data.

Anatomical sequences¶

Name	Suffix	Voxel size	Slices	TR	TE	Duration
`anat-T1w_acq-t1w08mm`	T1w	0.8 mm	208	2400 ms	2.24 ms	06:38
`anat-T1w_acq-t1w10mm`	T1w	1.0 mm	176	2300 ms	2.94 ms	05:58
`anat-T2w_acq-t2w08mm`	T2w	0.8 mm	208	3200 ms	564 ms	05:57

Fieldmap sequences¶

Name	Suffix	Voxel size	Slices	TR	TE1	TE2	Intended for	Duration
`fmap_acq-gefmsl56`	n/a	2.4 mm	56	623.0 ms	4.92 ms	7.38 ms	`func-bold_task-X_acq-stdmb456sl`	01:52
`fmap_acq-gefm30mm48sl`	n/a	3.0 mm	56	532.0 ms	5.17 ms	7.63 ms	`func-bold_task-X_acq-nomb10mm36sl`	01:17

Functional (BOLD) sequences¶

Name	Suffix	Voxel size	Slices	Echos	TR	TE1	TE2	TE3	TE4
`func-bold_task-X_acq-stdmb456sl`	bold	2.4 mm	56	1	1050 ms	32.0 ms	n/a	n/a	n/a
`func-bold_task-X_acq-mb4mesl56`	bold	2.5 mm	56	4	1299 ms	12.40 ms	30.13 ms	47.86 ms	65.59 ms
`func-bold_task-X_acq-nomb10mm36sl`	bold	3.0 mm	36	1	2250 ms	30.0 ms	n/a	n/a	n/a

Duration

The duration must be adjusted to your task.

Diffusion weighted imaging sequences¶

Name	Suffix	Voxel size	Slices	TR	TE	Duration
`dwi-dwi_acq-256dir_dir-AP`	dwi	2.0 mm	72	2490 ms	99.20 ms	11:01
`dwi-dwi_acq-sixdir_dir-PA`	dwi	2.0 mm	72	2490.0 ms	99.20 ms	00:19
`dwi-dwi_acq-sixdir_dir-AP`	dwi	2.0 mm	72	2490.0 ms	99.20 ms	00:19